STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADO49850.1KEGG: kva:Kvar_4259 hypothetical protein. (568 aa)    
Predicted Functional Partners:
ADO49851.1
KEGG: ent:Ent638_0663 putative periplasmic protein.
 
   
 0.953
ADO49147.1
PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: cko:CKO_02181 DNA translocase FtsK.
   
 
 0.675
ADO48658.1
KEGG: cko:CKO_01465 hypothetical protein.
  
  
 0.616
ADO49305.1
PFAM: Pectinesterase; KEGG: enc:ECL_02969 putative pectinesterase.
  
   
 0.599
ADO50321.1
Manually curated; PFAM: Sel1 domain protein repeat-containing protein; KEGG: enc:ECL_00332 Sel1 domain-containing protein; SMART: Sel1 domain protein repeat-containing protein.
 
  
 0.582
ADO47807.1
PFAM: TonB-dependent receptor plug; TonB-dependent receptor; KEGG: ent:Ent638_2756 colicin I receptor.
  
 
 
 0.579
ADO47177.1
KEGG: kpe:KPK_0881 hypothetical protein.
  
     0.563
ADO47459.1
KEGG: enc:ECL_03892 hypothetical protein.
    
 
 0.563
ADO50007.1
KEGG: cro:ROD_48671 transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR.
  
   
 0.557
ADO49457.1
KEGG: cro:ROD_05931 ferrienterobactin TonB-dependent receptor (enterobactin outer-membrane receptor); TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug.
  
 
 
 0.547
Your Current Organism:
Enterobacter lignolyticus
NCBI taxonomy Id: 701347
Other names: Enterobacter lignolyticus SCF1, [. lignolyticus SCF1, [Enterobacter] lignolyticus SCF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.