STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUW_0432HAD hydrolase, family IA, variant 1; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549. (238 aa)    
Predicted Functional Partners:
CUW_0431
Methyltransferase domain protein; Identified by match to protein family HMM PF08241; match to protein family HMM PF08242.
       0.776
CUW_0430
Conserved hypothetical protein.
       0.727
CUW_0429
Hypothetical protein; Identified by glimmer; putative.
       0.595
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.496
CUW_1568
Hypothetical protein; Identified by glimmer; putative.
  
 0.496
CUW_0433
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
       0.475
mutY
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
 
   
 0.435
CUW_2716
Trypsin; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00089; match to protein family HMM PF00595.
 
 
 0.429
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
  
 
 0.417
Your Current Organism:
Turicibacter sanguinis
NCBI taxonomy Id: 702450
Other names: T. sanguinis PC909, Turicibacter sanguinis PC909, Turicibacter sanguinis str. PC909, Turicibacter sanguinis strain PC909, Turicibacter sp. PC909
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.