STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUW_2698FAD binding domain protein; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF04205; match to protein family HMM PF07992. (637 aa)    
Predicted Functional Partners:
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Identified by match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02176.
  
 
 0.999
hymB
Protein HymB; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.
 
 
 0.989
CUW_1503
Oxidoreductase, FAD/FMN-binding; Identified by match to protein family HMM PF00724.
 
  
 0.884
CUW_2320
4Fe-4S binding domain protein; Identified by match to protein family HMM PF00037.
  
 
 0.876
CUW_0743
FAD dependent oxidoreductase; Identified by match to protein family HMM PF00355; match to protein family HMM PF01266.
  
 
 0.768
CUW_1167
4Fe-4S binding domain protein; Identified by match to protein family HMM PF00037.
  
 
 0.731
CUW_0597
Conserved hypothetical protein; Identified by match to protein family HMM PF04060.
  
 
 0.666
adh
Aldehyde-alcohol dehydrogenase 2; This gene contains a nucleotide ambiguity which may be the result of a sequencing error; identified by match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.653
aad
Aldehyde-alcohol dehydrogenase; Identified by match to protein family HMM PF00465; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.653
CUW_2409
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type; Identified by match to protein family HMM PF05681; match to protein family HMM TIGR00722.
  
  
 0.652
Your Current Organism:
Turicibacter sanguinis
NCBI taxonomy Id: 702450
Other names: T. sanguinis PC909, Turicibacter sanguinis PC909, Turicibacter sanguinis str. PC909, Turicibacter sanguinis strain PC909, Turicibacter sp. PC909
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.