J9JV52_ACYPI protein (Acyrthosiphon pisum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

J9JV52_ACYPI

Uncharacterized protein. (399 aa)

Predicted Functional Partners:

J9JPS4_ACYPI

0.675

J9K9U2_ACYPI

0.673

J9JSR9_ACYPI

0.637

J9JWT8_ACYPI

0.550

J9JU55_ACYPI

0.459

ACYPI009532

0.404

Your Current Organism:

Acyrthosiphon pisum

NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACYPI009532	J9JV52_ACYPI	C4WS28	J9JV52	Peptidylprolyl isomerase.	Uncharacterized protein.	0.404
J9JPS4_ACYPI	J9JSR9_ACYPI	J9JPS4	J9JSR9	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	BBS1 domain-containing protein.	0.995
J9JPS4_ACYPI	J9JV52_ACYPI	J9JPS4	J9JV52	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	Uncharacterized protein.	0.675
J9JSR9_ACYPI	J9JPS4_ACYPI	J9JSR9	J9JPS4	BBS1 domain-containing protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.995
J9JSR9_ACYPI	J9JV52_ACYPI	J9JSR9	J9JV52	BBS1 domain-containing protein.	Uncharacterized protein.	0.637
J9JU55_ACYPI	J9JV52_ACYPI	J9JU55	J9JV52	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	Uncharacterized protein.	0.459
J9JV52_ACYPI	ACYPI009532	J9JV52	C4WS28	Uncharacterized protein.	Peptidylprolyl isomerase.	0.404
J9JV52_ACYPI	J9JPS4_ACYPI	J9JV52	J9JPS4	Uncharacterized protein.	Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.	0.675
J9JV52_ACYPI	J9JSR9_ACYPI	J9JV52	J9JSR9	Uncharacterized protein.	BBS1 domain-containing protein.	0.637
J9JV52_ACYPI	J9JU55_ACYPI	J9JV52	J9JU55	Uncharacterized protein.	Protein RER1; Involved in the retrieval of endoplasmic reticulum membrane proteins from the early Golgi compartment.	0.459
J9JV52_ACYPI	J9JWT8_ACYPI	J9JV52	J9JWT8	Uncharacterized protein.	Uncharacterized protein.	0.550
J9JV52_ACYPI	J9K9U2_ACYPI	J9JV52	J9K9U2	Uncharacterized protein.	Uncharacterized protein.	0.673
J9JWT8_ACYPI	J9JV52_ACYPI	J9JWT8	J9JV52	Uncharacterized protein.	Uncharacterized protein.	0.550
J9K9U2_ACYPI	J9JV52_ACYPI	J9K9U2	J9JV52	Uncharacterized protein.	Uncharacterized protein.	0.673