J9JX54_ACYPI protein (Acyrthosiphon pisum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

J9JX54_ACYPI

Uncharacterized protein. (211 aa)

Predicted Functional Partners:

X1WIT2_ACYPI

0.999

J9K3U7_ACYPI

0.992

J9JPN5_ACYPI

0.990

J9K9J0_ACYPI

0.990

J9JXI4_ACYPI

0.984

X1XSM3_ACYPI

0.984

J9K0X8_ACYPI

0.979

X1WKI8_ACYPI

0.969

J9K6W6_ACYPI

0.934

J9JS01_ACYPI

0.932

Your Current Organism:

Acyrthosiphon pisum

NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
J9JPN5_ACYPI	J9JS01_ACYPI	J9JPN5	J9JS01	FYVE-type domain-containing protein.	Uncharacterized protein.	0.443
J9JPN5_ACYPI	J9JX54_ACYPI	J9JPN5	J9JX54	FYVE-type domain-containing protein.	Uncharacterized protein.	0.990
J9JPN5_ACYPI	J9K0X8_ACYPI	J9JPN5	J9K0X8	FYVE-type domain-containing protein.	FYVE-type domain-containing protein.	0.650
J9JPN5_ACYPI	J9K3U7_ACYPI	J9JPN5	J9K3U7	FYVE-type domain-containing protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.777
J9JPN5_ACYPI	J9K6W6_ACYPI	J9JPN5	J9K6W6	FYVE-type domain-containing protein.	Uncharacterized protein.	0.822
J9JPN5_ACYPI	X1WIT2_ACYPI	J9JPN5	X1WIT2	FYVE-type domain-containing protein.	VPS9 domain-containing protein.	0.743
J9JPN5_ACYPI	X1WKI8_ACYPI	J9JPN5	X1WKI8	FYVE-type domain-containing protein.	Uncharacterized protein.	0.467
J9JS01_ACYPI	J9JPN5_ACYPI	J9JS01	J9JPN5	Uncharacterized protein.	FYVE-type domain-containing protein.	0.443
J9JS01_ACYPI	J9JX54_ACYPI	J9JS01	J9JX54	Uncharacterized protein.	Uncharacterized protein.	0.932
J9JS01_ACYPI	J9K0X8_ACYPI	J9JS01	J9K0X8	Uncharacterized protein.	FYVE-type domain-containing protein.	0.917
J9JS01_ACYPI	J9K6W6_ACYPI	J9JS01	J9K6W6	Uncharacterized protein.	Uncharacterized protein.	0.463
J9JS01_ACYPI	J9K9J0_ACYPI	J9JS01	J9K9J0	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.598
J9JX54_ACYPI	J9JPN5_ACYPI	J9JX54	J9JPN5	Uncharacterized protein.	FYVE-type domain-containing protein.	0.990
J9JX54_ACYPI	J9JS01_ACYPI	J9JX54	J9JS01	Uncharacterized protein.	Uncharacterized protein.	0.932
J9JX54_ACYPI	J9JXI4_ACYPI	J9JX54	J9JXI4	Uncharacterized protein.	Uncharacterized protein.	0.984
J9JX54_ACYPI	J9K0X8_ACYPI	J9JX54	J9K0X8	Uncharacterized protein.	FYVE-type domain-containing protein.	0.979
J9JX54_ACYPI	J9K3U7_ACYPI	J9JX54	J9K3U7	Uncharacterized protein.	Phosphatidylinositol 3-kinase catalytic subunit type 3.	0.992
J9JX54_ACYPI	J9K6W6_ACYPI	J9JX54	J9K6W6	Uncharacterized protein.	Uncharacterized protein.	0.934
J9JX54_ACYPI	J9K9J0_ACYPI	J9JX54	J9K9J0	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.990
J9JX54_ACYPI	X1WIT2_ACYPI	J9JX54	X1WIT2	Uncharacterized protein.	VPS9 domain-containing protein.	0.999