J9K2I9_ACYPI protein (Acyrthosiphon pisum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

J9K2I9_ACYPI

Histone H3. (698 aa)

Predicted Functional Partners:

J9K936_ACYPI

0.923

J9JJA5_ACYPI

0.912

J9JYW3_ACYPI

0.868

J9K5H2_ACYPI

0.841

X1XHG7_ACYPI

0.841

J9K797_ACYPI

0.753

J9K2G7_ACYPI

0.719

ACYPI009739

0.711

ACYPI008820

0.708

J9K7V7_ACYPI

0.695

Your Current Organism:

Acyrthosiphon pisum

NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACYPI008820	ACYPI009739	C4WRQ1	C4WX06	ACYPI008820 protein.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.913
ACYPI008820	J9JJA5_ACYPI	C4WRQ1	J9JJA5	ACYPI008820 protein.	Uncharacterized protein.	0.907
ACYPI008820	J9K2G7_ACYPI	C4WRQ1	J9K2G7	ACYPI008820 protein.	GLUE N-terminal domain-containing protein.	0.931
ACYPI008820	J9K2I9_ACYPI	C4WRQ1	J9K2I9	ACYPI008820 protein.	Histone H3.	0.708
ACYPI008820	J9K5H2_ACYPI	C4WRQ1	J9K5H2	ACYPI008820 protein.	Uncharacterized protein.	0.483
ACYPI008820	J9K7V7_ACYPI	C4WRQ1	J9K7V7	ACYPI008820 protein.	Uncharacterized protein.	0.933
ACYPI008820	X1XHG7_ACYPI	C4WRQ1	X1XHG7	ACYPI008820 protein.	SH3 domain-containing protein.	0.483
ACYPI009739	ACYPI008820	C4WX06	C4WRQ1	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	ACYPI008820 protein.	0.913
ACYPI009739	J9JJA5_ACYPI	C4WX06	J9JJA5	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.999
ACYPI009739	J9K2G7_ACYPI	C4WX06	J9K2G7	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	GLUE N-terminal domain-containing protein.	0.994
ACYPI009739	J9K2I9_ACYPI	C4WX06	J9K2I9	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Histone H3.	0.711
ACYPI009739	J9K5H2_ACYPI	C4WX06	J9K5H2	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.764
ACYPI009739	J9K7V7_ACYPI	C4WX06	J9K7V7	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	Uncharacterized protein.	0.993
ACYPI009739	X1XHG7_ACYPI	C4WX06	X1XHG7	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	SH3 domain-containing protein.	0.764
J9JJA5_ACYPI	ACYPI008820	J9JJA5	C4WRQ1	Uncharacterized protein.	ACYPI008820 protein.	0.907
J9JJA5_ACYPI	ACYPI009739	J9JJA5	C4WX06	Uncharacterized protein.	Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.	0.999
J9JJA5_ACYPI	J9K2G7_ACYPI	J9JJA5	J9K2G7	Uncharacterized protein.	GLUE N-terminal domain-containing protein.	0.976
J9JJA5_ACYPI	J9K2I9_ACYPI	J9JJA5	J9K2I9	Uncharacterized protein.	Histone H3.	0.912
J9JJA5_ACYPI	J9K5H2_ACYPI	J9JJA5	J9K5H2	Uncharacterized protein.	Uncharacterized protein.	0.907
J9JJA5_ACYPI	J9K797_ACYPI	J9JJA5	J9K797	Uncharacterized protein.	Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.	0.461