J9K950_ACYPI protein (Acyrthosiphon pisum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

J9K950_ACYPI

Mitochondrial inner membrane protease subunit. (406 aa)

Predicted Functional Partners:

ACYPI002116

0.835

ACYPI000712

0.820

ACYPI002673

0.814

J9JKH0_ACYPI

0.740

J9JJP5_ACYPI

0.729

J9KV69_ACYPI

0.702

J9JKG8_ACYPI

0.669

J9JLG2_ACYPI

0.663

ACYPI008652

0.647

J9JYI3_ACYPI

0.643

Your Current Organism:

Acyrthosiphon pisum

NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACYPI000712	ACYPI002116	C4WUH4	C4WSB1	ACYPI000712 protein.	ACYPI002116 protein.	0.996
ACYPI000712	ACYPI002673	C4WUH4	C4WU82	ACYPI000712 protein.	Signal peptidase complex subunit 3.	0.995
ACYPI000712	J9K950_ACYPI	C4WUH4	J9K950	ACYPI000712 protein.	Mitochondrial inner membrane protease subunit.	0.820
ACYPI002116	ACYPI000712	C4WSB1	C4WUH4	ACYPI002116 protein.	ACYPI000712 protein.	0.996
ACYPI002116	ACYPI002673	C4WSB1	C4WU82	ACYPI002116 protein.	Signal peptidase complex subunit 3.	0.996
ACYPI002116	J9K950_ACYPI	C4WSB1	J9K950	ACYPI002116 protein.	Mitochondrial inner membrane protease subunit.	0.835
ACYPI002673	ACYPI000712	C4WU82	C4WUH4	Signal peptidase complex subunit 3.	ACYPI000712 protein.	0.995
ACYPI002673	ACYPI002116	C4WU82	C4WSB1	Signal peptidase complex subunit 3.	ACYPI002116 protein.	0.996
ACYPI002673	J9K950_ACYPI	C4WU82	J9K950	Signal peptidase complex subunit 3.	Mitochondrial inner membrane protease subunit.	0.814
ACYPI008652	J9JLG2_ACYPI	C4WS20	J9JLG2	Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.	Peptidase_M3 domain-containing protein.	0.723
ACYPI008652	J9K950_ACYPI	C4WS20	J9K950	Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.	Mitochondrial inner membrane protease subunit.	0.647
J9JJP5_ACYPI	J9K950_ACYPI	J9JJP5	J9K950	Uncharacterized protein.	Mitochondrial inner membrane protease subunit.	0.729
J9JJP5_ACYPI	J9KV69_ACYPI	J9JJP5	J9KV69	Uncharacterized protein.	Uncharacterized protein.	0.992
J9JKG8_ACYPI	J9K950_ACYPI	J9JKG8	J9K950	Tr-type G domain-containing protein.	Mitochondrial inner membrane protease subunit.	0.669
J9JKH0_ACYPI	J9K950_ACYPI	J9JKH0	J9K950	Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.	Mitochondrial inner membrane protease subunit.	0.740
J9JLG2_ACYPI	ACYPI008652	J9JLG2	C4WS20	Peptidase_M3 domain-containing protein.	Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.	0.723
J9JLG2_ACYPI	J9K950_ACYPI	J9JLG2	J9K950	Peptidase_M3 domain-containing protein.	Mitochondrial inner membrane protease subunit.	0.663
J9JYI3_ACYPI	J9K950_ACYPI	J9JYI3	J9K950	Uncharacterized protein.	Mitochondrial inner membrane protease subunit.	0.643
J9K950_ACYPI	ACYPI000712	J9K950	C4WUH4	Mitochondrial inner membrane protease subunit.	ACYPI000712 protein.	0.820
J9K950_ACYPI	ACYPI002116	J9K950	C4WSB1	Mitochondrial inner membrane protease subunit.	ACYPI002116 protein.	0.835