J9LAN6_ACYPI protein (Acyrthosiphon pisum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

J9LAN6_ACYPI

Uncharacterized protein. (777 aa)

Predicted Functional Partners:

J9KAJ5_ACYPI

0.758

Cog6

0.715

J9K1K0_ACYPI

0.694

J9K9C3_ACYPI

0.644

J9JYY8_ACYPI

0.643

J9JNQ2_ACYPI

0.639

J9K1S8_ACYPI

0.630

ACYPI005725

0.623

J9K053_ACYPI

0.562

J9JZW0_ACYPI

0.487

Your Current Organism:

Acyrthosiphon pisum

NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACYPI005725	Cog6	C4WY43	X1WYM6	ACYPI005725 protein.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.997
ACYPI005725	J9JNQ2_ACYPI	C4WY43	J9JNQ2	ACYPI005725 protein.	Uncharacterized protein.	0.997
ACYPI005725	J9JYY8_ACYPI	C4WY43	J9JYY8	ACYPI005725 protein.	Uncharacterized protein.	0.996
ACYPI005725	J9JZW0_ACYPI	C4WY43	J9JZW0	ACYPI005725 protein.	RIC1 domain-containing protein.	0.717
ACYPI005725	J9K053_ACYPI	C4WY43	J9K053	ACYPI005725 protein.	Uncharacterized protein.	0.997
ACYPI005725	J9K1K0_ACYPI	C4WY43	J9K1K0	ACYPI005725 protein.	Uncharacterized protein.	0.997
ACYPI005725	J9K1S8_ACYPI	C4WY43	J9K1S8	ACYPI005725 protein.	Uncharacterized protein.	0.995
ACYPI005725	J9KAJ5_ACYPI	C4WY43	J9KAJ5	ACYPI005725 protein.	Cog4 domain-containing protein.	0.995
ACYPI005725	J9LAN6_ACYPI	C4WY43	J9LAN6	ACYPI005725 protein.	Uncharacterized protein.	0.623
Cog6	ACYPI005725	X1WYM6	C4WY43	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	ACYPI005725 protein.	0.997
Cog6	J9JNQ2_ACYPI	X1WYM6	J9JNQ2	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	Uncharacterized protein.	0.997
Cog6	J9JYY8_ACYPI	X1WYM6	J9JYY8	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	Uncharacterized protein.	0.997
Cog6	J9JZW0_ACYPI	X1WYM6	J9JZW0	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	RIC1 domain-containing protein.	0.751
Cog6	J9K053_ACYPI	X1WYM6	J9K053	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	Uncharacterized protein.	0.997
Cog6	J9K1K0_ACYPI	X1WYM6	J9K1K0	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	Uncharacterized protein.	0.997
Cog6	J9K1S8_ACYPI	X1WYM6	J9K1S8	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	Uncharacterized protein.	0.995
Cog6	J9KAJ5_ACYPI	X1WYM6	J9KAJ5	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	Cog4 domain-containing protein.	0.996
Cog6	J9LAN6_ACYPI	X1WYM6	J9LAN6	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	Uncharacterized protein.	0.715
J9JNQ2_ACYPI	ACYPI005725	J9JNQ2	C4WY43	Uncharacterized protein.	ACYPI005725 protein.	0.997
J9JNQ2_ACYPI	Cog6	J9JNQ2	X1WYM6	Uncharacterized protein.	Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.	0.997