STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J9LRD5_ACYPIDDE_Tnp_IS1595 domain-containing protein. (413 aa)    
Predicted Functional Partners:
J9JR32_ACYPI
DNA_mis_repair domain-containing protein.
    
 0.570
J9K4M7_ACYPI
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.557
X1XI05_ACYPI
MutS_I domain-containing protein.
  
 0.557
J9JKZ2_ACYPI
Uncharacterized protein.
   
 0.528
J9LB75_ACYPI
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.505
X1WIG8_ACYPI
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.501
X1WML6_ACYPI
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.501
X1WZE8_ACYPI
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.501
X1X0G1_ACYPI
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.501
ACYPI003821
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.500
Your Current Organism:
Acyrthosiphon pisum
NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid
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