STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J9M8X9_ACYPICCDC66 domain-containing protein. (577 aa)    
Predicted Functional Partners:
J9K837_ACYPI
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.648
X1WZS2_ACYPI
RPOLA_N domain-containing protein; Belongs to the RNA polymerase beta chain family.
   
 0.648
J9K936_ACYPI
Uncharacterized protein.
      
 0.619
X1WQ75_ACYPI
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
    
 
 0.584
X1XD56_ACYPI
Uncharacterized protein.
    
 
 0.584
ACYPI001769
ACYPI001769 protein.
    
 0.581
ACYPI000388
ACYPI000388 protein.
    
  0.539
ACYPI005782
ACYPI005782 protein.
    
  0.537
J9K765_ACYPI
Uncharacterized protein.
    
  0.536
J9KIG1_ACYPI
Uncharacterized protein.
   
 
 0.534
Your Current Organism:
Acyrthosiphon pisum
NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid
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