X1XU55_ACYPI protein (Acyrthosiphon pisum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

X1XU55_ACYPI

CCHC-type domain-containing protein. (733 aa)

Predicted Functional Partners:

X1X7S9_ACYPI

0.522

X1XM56_ACYPI

0.516

X1WZE4_ACYPI

0.515

X1WWT5_ACYPI

0.509

X1XKF6_ACYPI

0.509

X1XNN9_ACYPI

0.506

X1X5M6_ACYPI

0.504

X1WWG2_ACYPI

0.503

X1XJG7_ACYPI

0.502

X1XLA6_ACYPI

0.499

Your Current Organism:

Acyrthosiphon pisum

NCBI taxonomy Id: 7029
Other names: A. pisum, Acyrthosiphum pisum, pea aphid

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
X1WWG2_ACYPI	X1X7S9_ACYPI	X1WWG2	X1X7S9	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.515
X1WWG2_ACYPI	X1XLA6_ACYPI	X1WWG2	X1XLA6	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.504
X1WWG2_ACYPI	X1XU55_ACYPI	X1WWG2	X1XU55	Reverse transcriptase Ty1/copia-type domain-containing protein.	CCHC-type domain-containing protein.	0.503
X1WWT5_ACYPI	X1WZE4_ACYPI	X1WWT5	X1WZE4	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.521
X1WWT5_ACYPI	X1X7S9_ACYPI	X1WWT5	X1X7S9	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.503
X1WWT5_ACYPI	X1XLA6_ACYPI	X1WWT5	X1XLA6	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.476
X1WWT5_ACYPI	X1XU55_ACYPI	X1WWT5	X1XU55	Reverse transcriptase Ty1/copia-type domain-containing protein.	CCHC-type domain-containing protein.	0.509
X1WZE4_ACYPI	X1WWT5_ACYPI	X1WZE4	X1WWT5	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.521
X1WZE4_ACYPI	X1X5M6_ACYPI	X1WZE4	X1X5M6	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.533
X1WZE4_ACYPI	X1X7S9_ACYPI	X1WZE4	X1X7S9	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.522
X1WZE4_ACYPI	X1XKF6_ACYPI	X1WZE4	X1XKF6	Reverse transcriptase Ty1/copia-type domain-containing protein.	Histone H2B.	0.536
X1WZE4_ACYPI	X1XLA6_ACYPI	X1WZE4	X1XLA6	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.505
X1WZE4_ACYPI	X1XU55_ACYPI	X1WZE4	X1XU55	Reverse transcriptase Ty1/copia-type domain-containing protein.	CCHC-type domain-containing protein.	0.515
X1X5M6_ACYPI	X1WZE4_ACYPI	X1X5M6	X1WZE4	Reverse transcriptase Ty1/copia-type domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.533
X1X5M6_ACYPI	X1X7S9_ACYPI	X1X5M6	X1X7S9	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.516
X1X5M6_ACYPI	X1XLA6_ACYPI	X1X5M6	X1XLA6	Reverse transcriptase Ty1/copia-type domain-containing protein.	Integrase catalytic domain-containing protein.	0.504
X1X5M6_ACYPI	X1XU55_ACYPI	X1X5M6	X1XU55	Reverse transcriptase Ty1/copia-type domain-containing protein.	CCHC-type domain-containing protein.	0.504
X1X7S9_ACYPI	X1WWG2_ACYPI	X1X7S9	X1WWG2	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.515
X1X7S9_ACYPI	X1WWT5_ACYPI	X1X7S9	X1WWT5	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.503
X1X7S9_ACYPI	X1WZE4_ACYPI	X1X7S9	X1WZE4	Integrase catalytic domain-containing protein.	Reverse transcriptase Ty1/copia-type domain-containing protein.	0.522