STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flgF_1Putative proximal rod protein; Belongs to the flagella basal body rod proteins family. (241 aa)    
Predicted Functional Partners:
flgE_1
Flagellar hook protein flgE.
 
 0.995
flgC_1
Putative proximal rod protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.994
flgD_1
Basal-body rod modification protein flgD; Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.994
flgH_1
Basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.992
flgI_1
Basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.990
flgG_1
Distal rod protein; Belongs to the flagella basal body rod proteins family.
 
 
0.989
flgB_1
Putative proximal rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.988
flgC_2
Putative proximal rod protein; Belongs to the flagella basal body rod proteins family.
 
 
 0.988
flgB_2
Putative proximal rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.983
flgE_2
Flagellar hook protein flgE.
 
 0.982
Your Current Organism:
Plesiomonas shigelloides
NCBI taxonomy Id: 703
Other names: ATCC 14029, Aeromonas shigelloides, CCUG 410, CDC 3085-55, CIP 63.5, DSM 8224, Fergusonia shigelloides, LMG 4242, LMG:4242, NCCB 80007, NCIB 9242, NCIMB 9242, NCTC 10360, P. shigelloides, Pleisomonas shigelloides, Pseudomonas shigelloides
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