STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M0T6Helicase, C-terminal. (626 aa)    
Predicted Functional Partners:
Q01AX3_OSTTA
Actin-related protein; Belongs to the actin family.
    
 0.743
A0A090N375
SWIB/MDM2 domain.
    
 0.739
A0A090MCB6
Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily.
    
 0.735
A0A090M3P6
Zinc finger, NHR/GATA-type.
    
 0.733
A0A090M310
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.658
A0A090M6Y4
Zinc finger, ZZ-type.
    
 0.638
A0A090LZ88
Bromodomain, conserved site.
    
 
 0.538
A0A090M1E8
Nucleotide-binding, alpha-beta plait.
    
  0.468
A0A090M8G4
Actin-related protein 7, plant; Belongs to the actin family.
   
 0.462
A0A090M8G6
Actin-related protein; Belongs to the actin family.
   
 0.462
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.