STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M6U0Guanylate kinase. (191 aa)    
Predicted Functional Partners:
A0A090N2V2
Snf7.
   
0.986
A0A096PAZ5
Snf7.
   
0.977
Q00T60_OSTTA
Snf7.
   
 0.970
A0A090M518
MIT; Belongs to the AAA ATPase family.
    
 0.936
A0A090M880
EAP30.
   
 0.910
A0A096PAP7
ESCRT-II complex, vps25 subunit.
   
 0.910
A0A096P820
EAP30.
    
 0.905
A0A090M078
Snf7.
  
 0.901
A0A090LY40
Vacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.899
Q01DC3_OSTTA
Steadiness box.
   
 0.887
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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