STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090M758Phytanoyl-CoA dioxygenase. (395 aa)    
Predicted Functional Partners:
Q00YE0_OSTTA
DNA polymerase alpha/epsilon, subunit B.
    
 0.560
A0A090LZW6
Unnamed product.
    
 0.538
A0A090M482
Unnamed product.
    
  0.534
A0A090M5L0
DNA repair nuclease, XPF-type/Helicase.
    
 0.530
A0A096PBP8
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.526
A0A090M7S5
DNA polymerase.
   
 0.525
A0A096P9N2
Small nuclear ribonucleoprotein Sm D2.
    
 0.525
A0A090M4S1
Ribonucleoprotein LSM domain,eukaryotic/archaea-type.
    
  0.505
A0A096P7C9
Small nuclear ribonucleoprotein G.
    
  0.499
A0A090M210
Helicase, C-terminal.
   
 0.489
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.