STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A090N4G3Thiaminase-2/PQQ biosynthesis protein C. (234 aa)    
Predicted Functional Partners:
A0A090N4G2
Phosphomethylpyrimidine kinase type-1.
 
  
 0.983
A0A096P8I9
Thiamin pyrophosphokinase, catalytic domain.
    
 0.946
Q010M4_OSTTA
Ribosome biogenesis GTPase RsgA, putative.
    
  0.909
A0A096PBR8
N-acetyl-gamma-glutamyl-phosphate reductase, type 2.
     
 0.688
Q00VV4_OSTTA
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.
  
  
 0.466
Q01F74_OSTTA
Signal recognition particle, SRP54 subunit,helical bundle.
  
  
 0.461
A0A090N2L9
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
   
  
 0.439
A0A090N2N9
Aspartokinase; Belongs to the aspartokinase family.
     
 0.431
A0A090M8J0
Pterin-binding.
     
 0.427
Q01F10_OSTTA
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
   
 
 0.422
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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