STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q011L3_OSTTARmlC-like jelly roll fold; Belongs to the pirin family. (307 aa)    
Predicted Functional Partners:
A0A090N462
Moybdenum cofactor oxidoreductase, dimerisation.
  
 0.472
Q010H4_OSTTA
Cytochrome b5-like heme/steroid binding domain; Belongs to the cytochrome b5 family.
  
 0.472
A0A090M4V3
Glycosyl hydrolase, family 13, catalytic domain.
   
 0.464
A0A090M6X9
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
   
 0.464
A0A090M961
Glycosyl hydrolase, family 13, catalytic domain.
   
 0.464
A0A090MB03
Alpha-ketoglutarate-dependent dioxygenase AlkB-like.
   
 0.464
A0A096P830
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
   
 0.464
A0A096P8E7
Glycosyl hydrolase, family 13, catalytic domain.
   
 0.464
A0A096PAT5
Alpha-ketoglutarate-dependent dioxygenase AlkB-like.
   
 0.464
Q00TX2_OSTTA
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
   
 0.464
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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