STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl2050S ribosomal protein L20, chloroplastic; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (111 aa)    
Predicted Functional Partners:
Q00VZ3_OSTTA
50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family.
  
 
 0.973
A0A090LZP7
Ribosomal protein S3, eukaryotic/archaeal.
   
 
 0.972
A0A090N4J1
Ribosomal protein S19 conserved site; Belongs to the universal ribosomal protein uS19 family.
   
 
 0.972
A0A090M8Z5
Ribosomal protein L25/L23.
   
 
 0.971
A0A096PAI1
Ribosomal protein L18/L5.
   
 
 0.971
A0A090M4E6
Ribosomal protein S6.
  
 
 0.970
A0A096PBL2
Ribosomal protein L33, conserved site.
  
 
 0.968
A0A096P7B8
Ribosomal protein L30, ferredoxin-like fold domain.
   
 
 0.964
A0A090M2L4
Ribosomal protein L2, bacterial/organellar-type.
   
 
 0.942
rpl2
50S ribosomal protein L2, chloroplastic; Belongs to the universal ribosomal protein uL2 family.
   
 
 0.942
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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