STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CycHCyclin C; Belongs to the cyclin family. (322 aa)    
Predicted Functional Partners:
A0A090M365
Serine/threonine-protein kinase, active site; Belongs to the protein kinase superfamily.
    
 0.999
Q00YU0_OSTTA
Cdk-activating kinase assembly factor MAT1,centre.
   
 0.999
A0A090LXK1
TFIIH subunit Tfb4/p34.
   
 0.996
Q00TJ6_OSTTA
BSD.
    
 0.995
Q01C90_OSTTA
Helicase, C-terminal.
    
 0.995
A0A090MB65
P-loop containing nucleoside triphosphate hydrolase.
    
 0.991
A0A090M795
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.990
Q017B7_OSTTA
General transcription factor IIH subunit.
   
 0.988
Q01FP4_OSTTA
Transcription factor TFIIE, alpha subunit.
    
 0.981
Q01BY1_OSTTA
Transcription factor TFIIE beta subunit,DNA-binding domain.
    
 0.980
Your Current Organism:
Ostreococcus tauri
NCBI taxonomy Id: 70448
Other names: O. tauri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.