STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0022373aa long hypothetical sugar-binding transport ATP-binding protein; Similar to owl:D8302640 percent identity: 48.753 in 366aa; owl:S76829 percent identity: 49.307 in 364aa; owl:SLU12007 percent identity: 55.185 in 270aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop). (373 aa)    
Predicted Functional Partners:
PH0154
248aa long hypothetical transport system protein; Part of the ABC transporter complex WtpABC involved in molybdate/tungstate import. Probably responsible for the translocation of the substrate across the membrane (By similarity).
 
 0.919
PH0023
277aa long hypothetical sugar transport membrane protein; Similar to PIR:S33182 percent identity: 32.653 in 197aa; owl:MLU1518036 percent identity: 32.143 in 197aa. motif=binding-protein-dependent transport systems inner membrane componentsignature.
 
   
 0.908
PH0756
357aa long hypothetical sugar transport ATP-binding protein; Similar to owl:S76829 percent identity: 55.830 in 286aa; Swiss_Prot:P10907 percent identity: 47.025 in 358aa; owl:RZAE0000893 percent identity: 46.307 in 360aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop).
  
  
 
0.903
PH0194
375aa long hypothetical multiple sugar-binding transport ATP-binding protein; Similar to owl:D8302640 percent identity: 57.025 in 372aa; Swiss_Prot:Q00752 percent identity: 53.846 in 383aa; owl:MLU1518037 percent identity: 57.680 in 329aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop).
  
  
 
0.902
PH0505
324aa long hypothetical oligopeptide transport ATP-binding protein AppF; Similar to Swiss_Prot:P42065 percent identity: 45.763 in 302aa; Swiss_Prot:P26905 percent identity: 43.269 in 319aa; owl:RSPNGR2342 percent identity: 40.064 in 318aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop).
 
     
0.899
PH0024
284aa long hypothetical sugar transport membrane protein; Similar to owl:MLU1518035 percent identity:32.227 in 219aa; Swiss_Prot:P29823 percent identity:32.558 in 223aa. motif=binding-protein-dependent transport systems inner membrane componentsignature.
 
   
 0.891
PH1735
582aa long hypothetical ABC transporter ATP-binding protein; Similar to Swiss_Prot:P54719 percent identity: 36.445 in 559aa; owl:TTU509513 percent identity: 33.919 in 572aa; owl:BSZ820444 percent identity: 33.624 in 583aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop).
 
     
0.889
PH1215
292aa long hypothetical sugar-binding transport system permease protein; Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily.
 
  
 0.845
PH1214
441aa long hypothetical cytoplasmic protein; Probably part of a binding-protein-dependent transport system PH1214/15/16; Belongs to the bacterial solute-binding protein 1 family.
    
 0.819
PH1216
275aa long hypothetical protein; Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. MalFG subfamily.
    
 0.816
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.