STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0028621aa long hypothetical aldehyde:ferredoxin oxidoreductase; Similar to owl:PFAOR1 percent identity: 36.565 in 617aa; owl:TLFORPKPF2 percent identity: 37.585 in 457aa; owl:ECAE0002626 percent identity: 43.925 in 222aa. motif=ATP/GTP-binding site motif A (P-loop). (621 aa)    
Predicted Functional Partners:
PH0495
440aa long hypothetical protein; Catalyzes the ATP-dependent phosphorylation of D-glycerate to 2-phosphoglycerate. It can also utilize GTP, CTP, UTP, ADP or pyrophosphate as phosphate donor.
     
  0.900
PH0031
273aa long hypothetical morphine 6-dehydrogenase; Similar to owl:D908222 percent identity: 39.600 in 264aa; owl:D9082112 percent identity: 40.175 in 239aa. motif=aldo/keto reductase family signatures.
       0.819
PH0893
161aa long hypothetical protein; motif=4Fe-4S ferredoxins, iron-sulfur binding region signature; cytochrome c family heme-binding site signature.
  
 
 0.803
PH0032
370aa long hypothetical protein.
       0.741
PH0034
335aa long hypothetical protein; Similar to PIR:E64499 percent identity: 38.835 in 323aa; PIR:S74983 percent identity: 34.568 in 341aa; Belongs to the UPF0284 family.
       0.644
PH1750
168aa long hypothetical ferredoxin; Similar to PIR:A42960 percent identity:37.209 in 43aa; Swiss_Prot:P00202 percent identity:37.209 in 43aa. motif=4Fe-4S ferredoxins, iron-sulfur binding region signature.
   
 
 0.499
PH0035
102aa long hypothetical protein.
       0.484
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.