STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0186251aa long hypothetical protein; Similar to PIR:F64469 percent identity: 41.026 in 239aa; owl:S76478 percent identity: 37.021 in 243aa; owl:S76850 percent identity: 35.193 in 240aa. motif=ATP/GTP-binding site motif A (P-loop). (251 aa)    
Predicted Functional Partners:
PH0187
251aa long hypothetical protein; Similar to PIR:F64469 percent identity:32.159 in 239aa. motif=ATP/GTP-binding site motif A (P-loop).
 
    
0.832
PH0213
171aa long hypothetical protein.
     
 0.722
PH0188
233aa long hypothetical protein.
       0.687
PH0189
373aa long hypothetical protein; Similar to PIR:F64434 percent identity:29.508 in 395aa. motif=tubulin-beta mRNA autoregulation signal.
       0.683
PH0185
310aa long hypothetical protein.
       0.550
PH0190
193aa long hypothetical protein.
       0.483
PH0191
189aa long hypothetical L-fuculose phosphate aldolase; Similar to PIR:A64477 percent identity: 39.333 in 153aa.
       0.483
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.