STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0193633aa long hypothetical alpha-amylase; Similar to Swiss_Prot:P49067 percent identity: 65.231 in 647aa; Swiss_Prot:P09961 percent identity: 48.869 in 453aa. (633 aa)    
Predicted Functional Partners:
PH1386
560aa long hypothetical protein; Similar to owl:S76831 percent identity: 36.270 in 542aa; Belongs to the glycosyl hydrolase 57 family.
 
  
 0.933
PH0069
456aa long hypothetical protein; Similar to PIR:F64500 percent identity:32.993 in 318aa.
  
 
 0.927
PH1512
837aa long hypothetical protein; Similar to Swiss_Prot:Q10639 percent identity: 39.944 in 751aa. motif=phosphorylase pyridoxal-phosphate attachment site.
  
 
 0.927
PH0923
455aa long hypothetical phospho-sugar mutase; Similar to PIR:C64437 percent identity: 41.839 in 455aa; owl:SAFEMD percent identity: 34.259 in 445aa; owl:SAURED percent identity: 34.259 in 445aa. motif=prokaryotic membrane lipoprotein lipid attachment site.
    
 0.912
PH0194
375aa long hypothetical multiple sugar-binding transport ATP-binding protein; Similar to owl:D8302640 percent identity: 57.025 in 372aa; Swiss_Prot:Q00752 percent identity: 53.846 in 383aa; owl:MLU1518037 percent identity: 57.680 in 329aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop).
       0.590
PH0192
129aa long hypothetical protein.
       0.572
PH1015
272aa long hypothetical protein; Diadenylate cyclase that catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP is a second messenger for intracellular signal transduction involved in the control of important regulatory processes such as osmoregulation.
  
     0.470
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.