STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0256377aa long hypothetical protein; Similar to owl:SS56KBFR33 percent identity: 33.134 in 364aa. motif=neutral zinc metallopeptidases, zinc-binding region signature. (377 aa)    
Predicted Functional Partners:
PH0255
175aa long hypothetical protein.
       0.790
PH0253
235aa long hypothetical protein.
       0.783
PH1590
264aa long hypothetical protein; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
  
  
 0.646
PH1408
226aa long hypothetical protein; Catalyzes the reversible phosphorylation of UMP to UDP.
 
  
 0.581
PH0258
168aa long hypothetical protein.
       0.559
PH0259
243aa long hypothetical protein; Similar to PIR:E64416 percent identity: 36.486 in 225aa.
       0.514
PH0333
399aa long hypothetical protein.
   
  
 0.497
PH1552
236aa long hypothetical protein; Similar to PIR:H64373 percent identity: 54.113 in 231aa; Belongs to the SDO1/SBDS family.
  
     0.449
PH1893
361aa long hypothetical protein; Similar to PIR:F64444 percent identity:33.486 in 240aa.
  
   
 0.448
PH0290
431aa long hypothetical histidyl-tRNA synthetase; Similar to PIR:G64424 percent identity: 45.854 in 425aa; owl:HPAE0006251 percent identity: 33.577 in 418aa; Swiss_Prot:P46220 percent identity: 46.617 in 133aa; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.436
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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