STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0460188aa long hypothetical protein; Catalyzes the formation of archaetidylinositol phosphate (AIP) from CDP-archaeol (CDP-ArOH or CDP-2,3-bis-(O-phytanyl)-sn- glycerol) and 1L-myo-inositol 1-phosphate (IP or 1D-myo-inositol 3- phosphate). AIP is a precursor of archaetidyl-myo-inositol (AI), an ether-type inositol phospholipid ubiquitously distributed in archaea membranes and essential for glycolipid biosynthesis in archaea. (188 aa)    
Predicted Functional Partners:
PH1605
425aa long hypothetical protein.
 
   
 0.865
PH0461
206aa long hypothetical protein; Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs. Belongs to the aTrm56 family.
       0.819
PH0462
530aa long hypothetical protein; Motif=prokaryotic membrane lipoprotein lipid attachment site.
       0.819
PH1354
196aa long hypothetical protein; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.
     
 0.771
PH0439
255aa long hypothetical competence-damage protein; Similar to owl:SS56KBFR18 percent identity: 45.455 in 219aa; owl:D908567 percent identity: 38.953 in 180aa; owl:BSU877925 percent identity: 37.222 in 188aa; Belongs to the CinA family.
  
  
 0.740
PH1989
335aa long hypothetical protein; Similar to PIR:B64499 percent identity: 25.316 in 325aa.
 
  
 0.731
PH0463
256aa long hypothetical protein; Similar to owl:HPAE0005842 percent identity: 42.384 in 155aa.
       0.685
PH0464
186aa long hypothetical protein; Similar to PIR:E64367 percent identity: 59.756 in 166aa.
 
     0.675
PH1590
264aa long hypothetical protein; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
  
 
 0.662
PH0374
147aa long hypothetical protein; Similar to PIR:A64466 percent identity: 51.754 in 127aa.
     
 0.645
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.