STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0501483aa long hypothetical beta-mannosidase; Similar to owl:PFU60214 percent identity: 60.587 in 490aa; Swiss_Prot:P14288 percent identity: 43.231 in 477aa; Swiss_Prot:P22498 percent identity: 43.601 in 480aa. motif=glycosyl hydrolases family 1 signatures. (483 aa)    
Predicted Functional Partners:
PH0511
778aa long hypothetical beta-galactosidase precursor; Exo-type enzyme that specifically cleaves the non-reducing terminal glycosidic bond of chitooligosaccharides. Catalyzes the hydrolysis of GlcN-GlcNAc to glucosamine (GlcN) and N-acetylglucosamine (GlcNAc). Involved in chitin degradation. Can also hydrolyze chitosan and chitooligosaccharides of various chain lengths ; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.953
PH0502
641aa long hypothetical protein.
 
   
 0.661
PH0503
330aa long hypothetical oligopeptide transport system permease protein AppB; Similar to owl:MMABCTRAN1 percent identity: 34.783 in 314aa; owl:RZAE00009811 percent identity: 30.844 in 324aa; Swiss_Prot:P37316 percent identity: 30.573 in 338aa.
 
     0.568
PH0500
149aa long hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. An RNase.
     
 0.526
PH0505
324aa long hypothetical oligopeptide transport ATP-binding protein AppF; Similar to Swiss_Prot:P42065 percent identity: 45.763 in 302aa; Swiss_Prot:P26905 percent identity: 43.269 in 319aa; owl:RSPNGR2342 percent identity: 40.064 in 318aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop).
       0.478
PH0504
304aa long hypothetical oligopeptide transport system permease protein AppC; Similar to owl:MMABCTRAN2 percent identity: 40.000 in 216aa; Swiss_Prot:P42063 percent identity: 33.484 in 222aa; PIR:JC5121 percent identity: 34.978 in 228aa.
       0.470
PH0507
321aa long hypothetical oligopeptide transport ATP-binding protein AppF; Similar to Swiss_Prot:P42065 percent identity: 44.898 in 299aa; owl:RSPNGR2343 percent identity: 41.924 in 295aa; Swiss_Prot:P45094 percent identity: 38.488 in 295aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop).
       0.470
PH0510
325aa long hypothetical protein.
       0.462
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.