STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0601138aa long hypothetical protein; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family. (138 aa)    
Predicted Functional Partners:
PH1592
141aa long hypothetical transcriptional regulator; Negatively regulates its own transcription.
   
  
 0.692
PH1210
453aa long hypothetical phospho-sugar mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
   
  
 0.655
PH1640
180aa long hypothetical 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.
      
 0.649
PH0600
392aa long hypothetical protein; Similar to PIR:C64475 percent identity: 30.888 in 262aa.
       0.540
PH0131
249aa long hypothetical protein; Similar to PIR:S62813 percent identity:37.736 in 108aa.
     
 0.489
PH1581
139aa long hypothetical protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
     
 0.489
PH1653
260aa long hypothetical ABC transporter; Similar to owl:AF00822022 percent identity:30.172 in 234aa; owl:TPU552142 percent identity:32.759 in 234aa; PIR:S61910 percent identity:34.348 in 233aa. motif=ABC transporters family signature; ATP/GTP-binding site motif A (P-loop).
     
 0.489
PH1651
276aa long hypothetical membrane protein; Similar to Swiss_Prot:P42361 percent identity:27.897 in 248aa.
     
 0.465
PH0988
331aa long hypothetical protein; Similar to Swiss_Prot:P44298 percent identity: 34.768 in 304aa; owl:ECAE0001749 percent identity: 33.770 in 314aa; owl:MTCY6A46 percent identity: 32.014 in 283aa.
 
     0.427
PH1294
429aa long hypothetical cytochrome-c3 hydrogenase alpha chain; Similar to PIR:S48836 percent identity: 86.215 in 428aa. motif=nickel-dependent hydrogenases large subunit signatures.
     
 0.411
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.