STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0612245aa long hypothetical cell division inhibitor MinD; Similar to PIR:C64368 percent identity: 41.379 in 233aa; PIR:B64321 percent identity: 35.841 in 227aa; owl:S76970 percent identity: 34.188 in 239aa. motif=ATP/GTP-binding site motif A (P-loop). (245 aa)    
Predicted Functional Partners:
PH1798
1179aa long hypothetical chromosome assembly protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.
     
 0.819
PH0611
252aa long hypothetical protein; Similar to Swiss_Prot:P46577 percent identity:30.736 in 238aa. motif=ATP/GTP-binding site motif A (P-loop).
       0.761
PH0606
1108aa long hypothetical cell division control protein; Similar to Swiss_Prot:P30665 percent identity:41.538 in 331aa. motif=ATP/GTP-binding site motif A (P-loop); protein splicing signature; Belongs to the MCM family.
       0.565
PH0610
165aa long hypothetical protein; motif=DEAD and DEAH box families ATP-dependent helicases signatures.
       0.564
PH0613
285aa long hypothetical protein.
       0.512
PH0605
140aa long hypothetical translation initiation factor eIF-2 beta; eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA; Belongs to the eIF-2-beta/eIF-5 family.
       0.474
PH0483
368aa long hypothetical protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
  
 0.469
PH0490
162aa long hypothetical protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
  
  
 0.419
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.