STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH0876472aa long hypothetical glutamate synthase small chain; Similar to owl:D86223 percent identity: 76.972 in 476aa; owl:ECAE0003335 percent identity: 39.052 in 457aa; Swiss_Prot:P09832 percent identity: 37.251 in 466aa. (472 aa)    
Predicted Functional Partners:
PH0878
285aa long hypothetical protein.
 
 0.996
PH1874
298aa long hypothetical protein.
 
 0.987
PH1516
303aa long hypothetical dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with NAD(+) as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily.
 
 
 0.957
PH1593
422aa long hypothetical glutamate dehydrogenase; Similar to owl:A47410 percent identity: 96.429 in 420aa; Swiss_Prot:P80319 percent identity: 95.952 in 420aa; owl:THCGLUDEHY percent identity: 87.799 in 419aa. motif=glu / Leu / Phe / Val dehydrogenases active site; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.957
PH0359
443aa long hypothetical glutamine synthetase; Probably involved in nitrogen metabolism via ammonium assimilation. Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia.
  
 
 0.938
PH0243
601aa long hypothetical glutamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
    
 0.926
PH1446
206aa long hypothetical NADH-plastoquinone oxidoreductase subunit; Similar to Swiss_Prot:P06253 percent identity:34.615 in 105aa; Swiss_Prot:Q00236 percent identity:34.314 in 103aa; Swiss_Prot:P06252 percent identity:34.615 in 105aa. motif=4Fe-4S ferredoxins, iron-sulfur binding region signature.
 
  
 0.925
PH0240
449aa long hypothetical amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
  
 
 0.923
PH0771
391aa long hypothetical aspartate aminotransferase; Similar to PIR:A64300 percent identity: 48.098 in 386aa; PIR:JC4537 percent identity: 41.026 in 355aa; owl:TAX99521 percent identity: 40.390 in 363aa. motif=aminotransferases class-I pyridoxal-phosphate attachment site; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.918
PH1353
679aa long hypothetical formate dehydrogenase; Similar to owl:MTU526812 percent identity: 48.550 in 677aa; Swiss_Prot:P06131 percent identity: 44.104 in 681aa; owl:MTU738071 percent identity: 43.381 in 646aa.
    
 0.914
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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