STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1045193aa long hypothetical protein; Motif=eukaryotic putative RNA-binding region RNP-1 signature. (193 aa)    
Predicted Functional Partners:
PH1046
350aa long hypothetical protein.
       0.773
PH1047
527aa long hypothetical protein.
       0.655
PH1048
320aa long hypothetical protein.
       0.650
PH1049
217aa long hypothetical aroM protein; Similar to Swiss_Prot:P08403 percent identity:27.700 in 219aa. motif=alpha-isopropylmalate and homocitrate synthases signatures.
       0.650
PH1050
315aa long hypothetical protein.
       0.650
PH1044
491aa long hypothetical protein; Similar to owl:BSY140812 percent identity: 34.873 in 437aa; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.419
PH1043
387aa long hypothetical amidohydrolase; Similar to Swiss_Prot:P80092 percent identity: 46.933 in 379aa; PIR:S76858 percent identity: 43.681 in 372aa; Swiss_Prot:P54955 percent identity: 44.986 in 358aa.
     
 0.408
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.