STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1431510aa long hypothetical protein; Similar to owl:D9087612 percent identity:36.747 in 341aa; owl:RRU655102 percent identity:35.459 in 412aa; owl:BSZ939328 percent identity:31.392 in 410aa. motif=prokaryotic membrane lipoprotein lipid attachment site. (510 aa)    
Predicted Functional Partners:
PH1429
147aa long hypothetical protein; Similar to PIR:B64463 percent identity:35.821 in 135aa.
 
 
 0.999
PH1430
120aa long hypothetical protein; Similar to PIR:E64463 percent identity:29.412 in 102aa; PIR:S61394 percent identity:35.644 in 107aa.
 
 
 0.999
PH1433
118aa long hypothetical protein.
   
   0.999
PH1439
321aa long hypothetical NADH-ubiquinone oxidoreductase subunit; Similar to owl:RRU655103 percent identity: 35.740 in 286aa; Swiss_Prot:P16430 percent identity:27.241 in 302aa.
 
 
 0.999
PH1434
173aa long hypothetical NADH-ubiquinone oxidoreductase subunit; Similar to owl:RRU655104 percent identity: 53.030 in 133aa; PIR:D64364 percent identity: 52.632 in 134aa; Swiss_Prot:P16433 percent identity: 46.259 in 147aa.
 
 
 0.986
PH1435
174aa long hypothetical protein.
 
 
   0.972
PH1437
427aa long hypothetical NADH-ubiquinone oxidoreductase subunit; Similar to owl:RRU655107 percent identity: 38.592 in 372aa; PIR:B64428 percent identity: 35.849 in 387aa; PIR:C64364 percent identity: 39.305 in 393aa.
 
 0.969
PH1427
167aa long hypothetical protein.
  
 
 0.958
PH1428
121aa long hypothetical protein; Similar to owl:RHMMUCR1 percent identity:35.000 in 111aa; owl:BSZ939326 percent identity:34.483 in 96aa. motif=G-protein coupled receptors signature; Belongs to the UPF0091 family.
  
 
 0.955
PHS039
64aa long hypothetical protein; Similar to PIR:E64354 percent identity: 33.929 in 56aa.
 
 
 0.950
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.