STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1440136aa long hypothetical NADH-plastoquinone oxidoreductase subunit; Similar to owl:RRU655105 percent identity:38.144 in 100aa; Swiss_Prot:P16432 percent identity:37.374 in 103aa; Swiss_Prot:P26525 percent identity:39.000 in 110aa. motif=4Fe-4S ferredoxins, iron-sulfur binding region signature. (136 aa)    
Predicted Functional Partners:
PH1434
173aa long hypothetical NADH-ubiquinone oxidoreductase subunit; Similar to owl:RRU655104 percent identity: 53.030 in 133aa; PIR:D64364 percent identity: 52.632 in 134aa; Swiss_Prot:P16433 percent identity: 46.259 in 147aa.
 
 
 0.999
PH1435
174aa long hypothetical protein.
 
 
   0.999
PH1437
427aa long hypothetical NADH-ubiquinone oxidoreductase subunit; Similar to owl:RRU655107 percent identity: 38.592 in 372aa; PIR:B64428 percent identity: 35.849 in 387aa; PIR:C64364 percent identity: 39.305 in 393aa.
 
 
 0.999
PH1439
321aa long hypothetical NADH-ubiquinone oxidoreductase subunit; Similar to owl:RRU655103 percent identity: 35.740 in 286aa; Swiss_Prot:P16430 percent identity:27.241 in 302aa.
 
 
 0.999
PH1447
394aa long hypothetical NADH-ubiquinone oxidoreductase subunit; Similar to Swiss_Prot:P22142 percent identity: 36.639 in 387aa; PIR:S53862 percent identity: 36.088 in 387aa; owl:TAU529173 percent identity: 35.215 in 396aa. motif=respiratory-chain NADH dehydrogenase 49 Kd subunit signature; Belongs to the complex I 49 kDa subunit family.
 
 0.989
PH1449
195aa long hypothetical NADH-ubiquinone oxidoreductase subunit; Similar to Swiss_Prot:P52766 percent identity:48.485 in 133aa; Swiss_Prot:P06410 percent identity:45.926 in 136aa; Swiss_Prot:P06409 percent identity:48.485 in 133aa; Belongs to the complex I 20 kDa subunit family.
 
 0.989
PH1448
174aa long hypothetical NADH-ubiquinone oxidoreductase subunit; Similar to Swiss_Prot:P23710 percent identity:33.628 in 119aa; Swiss_Prot:P34944 percent identity:32.743 in 119aa.
 
 0.984
PH1429
147aa long hypothetical protein; Similar to PIR:B64463 percent identity:35.821 in 135aa.
  
 
 0.940
PH1450
309aa long hypothetical NADH-ubiquinone oxidoreductase subunit; Similar to owl:RRU655103 percent identity:30.450 in 308aa.
 
 
 0.894
PH1431
510aa long hypothetical protein; Similar to owl:D9087612 percent identity:36.747 in 341aa; owl:RRU655102 percent identity:35.459 in 412aa; owl:BSZ939328 percent identity:31.392 in 410aa. motif=prokaryotic membrane lipoprotein lipid attachment site.
  
 
 0.886
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.