STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1463438aa long hypothetical L-asparaginase; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate. (438 aa)    
Predicted Functional Partners:
PH1464
635aa long hypothetical protein; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate.
 
 0.999
PH1465
650aa long hypothetical protein; Similar to PIR:H64502 percent identity: 40.689 in 678aa.
       0.773
PH1467
148aa long hypothetical protein.
       0.773
PH1462
483aa long hypothetical protein.
       0.639
PH1347
308aa long hypothetical GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.607
PH1102
480aa long hypothetical asparagine synthetase; Similar to PIR:C64439 percent identity: 45.304 in 190aa.
    
 0.605
PH1346
189aa long hypothetical GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
 
  0.555
PH0876
472aa long hypothetical glutamate synthase small chain; Similar to owl:D86223 percent identity: 76.972 in 476aa; owl:ECAE0003335 percent identity: 39.052 in 457aa; Swiss_Prot:P09832 percent identity: 37.251 in 466aa.
  
 
  0.542
PH1792
557aa long hypothetical CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
  
 
  0.542
PH1873
476aa long hypothetical glutamate synthase small chain; Similar to owl:D86223 percent identity: 82.553 in 472aa; PIR:JC5184 percent identity: 39.002 in 460aa; Swiss_Prot:P09832 percent identity: 36.947 in 472aa.
  
 
  0.542
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.