STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1510441aa long hypothetical nfeD protein; Protease that cleaves its substrates preferentially near hydrophobic or aromatic amino acid residues. Can degrade casein and the stomatin homolog PH1511 (in vitro). (441 aa)    
Predicted Functional Partners:
PH1511
266aa long hypothetical erythrocyte band7 integral membrane protein; Similar to Swiss_Prot:P27105 percent identity: 51.351 in 224aa; Swiss_Prot:P54116 percent identity: 49.145 in 236aa; owl:MMU17297 percent identity: 48.718 in 236aa; Belongs to the band 7/mec-2 family.
 
  
 0.985
PH0471
143aa long hypothetical protein.
  
  
 0.889
PH0470
298aa long hypothetical membrane protein; Similar to PIR:C64403 percent identity: 55.080 in 187aa; owl:MTCY2778 percent identity: 48.684 in 229aa; owl:ECAE0001554 percent identity: 44.958 in 239aa.
  
  
 0.806
PH1509
440aa long hypothetical NADH oxidase; Similar to PIR:A64381 percent identity: 45.909 in 449aa; owl:SHU19610 percent identity: 31.336 in 451aa; Swiss_Prot:P37061 percent identity: 29.792 in 445aa.
       0.536
PH1569
334aa long hypothetical protease IV; Similar to PIR:S76356 percent identity: 38.071 in 199aa; PIR:C64381 percent identity: 31.982 in 223aa; owl:AF008220138 percent identity: 36.264 in 185aa.
 
  
 0.432
PH1505
118aa long hypothetical protein.
 
     0.407
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.