STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PH1590264aa long hypothetical protein; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids. (264 aa)    
Predicted Functional Partners:
PH1072
342aa long hypothetical geranylgeranyl pyrophosphate synthetase; Similar to owl:S75695B percent identity: 49.226 in 337aa; PIR:D64407 percent identity: 52.218 in 309aa; owl:SS56KBFR60 percent identity: 44.610 in 272aa. motif=polyprenyl synthetases signatures; Belongs to the FPP/GGPP synthase family.
 
 
 0.982
PH1408
226aa long hypothetical protein; Catalyzes the reversible phosphorylation of UMP to UDP.
  
  
 0.840
PH0369
350aa long hypothetical galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P).
     
 0.836
PH1591
173aa long hypothetical ferripyochelin binding protein; Similar to PIR:A64338 percent identity: 54.795 in 146aa; Swiss_Prot:P40882 percent identity: 49.091 in 165aa; owl:AF00822046 percent identity: 43.396 in 159aa.
       0.819
PH0014
395aa long hypothetical protein.
      
 0.730
PH1446
206aa long hypothetical NADH-plastoquinone oxidoreductase subunit; Similar to Swiss_Prot:P06253 percent identity:34.615 in 105aa; Swiss_Prot:Q00236 percent identity:34.314 in 103aa; Swiss_Prot:P06252 percent identity:34.615 in 105aa. motif=4Fe-4S ferredoxins, iron-sulfur binding region signature.
     
 0.729
PH0416
188aa long hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
     
 0.723
PH0348
273aa long hypothetical UDP-N-acetylglucosamine-dolichyl-phosphate N-AceGluNH-phosphotransferase; Similar to owl:SS56KBFR61 percent identity: 34.074 in 288aa; PIR:H64438 percent identity: 37.109 in 273aa.
 
  
 0.714
PH1629
205aa long hypothetical 30S ribosomal protein S2; Similar to Swiss_Prot:P54109 percent identity: 66.667 in 192aa; owl:SS56KBFR54 percent identity: 57.071 in 198aa; Swiss_Prot:P29202 percent identity: 57.627 in 177aa. motif=ribosomal protein S2 signatures; Belongs to the universal ribosomal protein uS2 family.
 
  
 0.703
PH0384
330aa long hypothetical protein; Similar to Swiss_Prot:P25769 percent identity:29.474 in 97aa.
      
 0.701
Your Current Organism:
Pyrococcus horikoshii
NCBI taxonomy Id: 70601
Other names: P. horikoshii OT3, Pyrococcus horikoshii OT-3, Pyrococcus horikoshii OT3, Pyrococcus horikoshii str. OT3, Pyrococcus shinkaii OT3, Pyrococcus sp. OT3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.