Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PH0021 | PH0698 | gene:9376928 | gene:9377645 | 611aa long hypothetical protein; motif=ATP/GTP-binding site motif A (P-loop). | 160aa long hypothetical nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 0.921 |
| PH0021 | PH1792 | gene:9376928 | gene:9378794 | 611aa long hypothetical protein; motif=ATP/GTP-binding site motif A (P-loop). | 557aa long hypothetical CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.920 |
| PH0021 | PH1997 | gene:9376928 | gene:9379011 | 611aa long hypothetical protein; motif=ATP/GTP-binding site motif A (P-loop). | 156aa long hypothetical protein; Catalyzes the deamination of dCTP to dUTP. | 0.912 |
| PH0698 | PH0021 | gene:9377645 | gene:9376928 | 160aa long hypothetical nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 611aa long hypothetical protein; motif=ATP/GTP-binding site motif A (P-loop). | 0.921 |
| PH0698 | PH1347 | gene:9377645 | gene:9378323 | 160aa long hypothetical nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 308aa long hypothetical GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.820 |
| PH0698 | PH1408 | gene:9377645 | gene:9378384 | 160aa long hypothetical nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 226aa long hypothetical protein; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.954 |
| PH0698 | PH1629 | gene:9377645 | gene:9378619 | 160aa long hypothetical nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 205aa long hypothetical 30S ribosomal protein S2; Similar to Swiss_Prot:P54109 percent identity: 66.667 in 192aa; owl:SS56KBFR54 percent identity: 57.071 in 198aa; Swiss_Prot:P29202 percent identity: 57.627 in 177aa. motif=ribosomal protein S2 signatures; Belongs to the universal ribosomal protein uS2 family. | 0.991 |
| PH0698 | PH1634 | gene:9377645 | gene:9378625 | 160aa long hypothetical nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 142aa long hypothetical 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.942 |
| PH0698 | PH1763 | gene:9377645 | gene:9378760 | 160aa long hypothetical nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 187aa long hypothetical 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.835 |
| PH0698 | PH1792 | gene:9377645 | gene:9378794 | 160aa long hypothetical nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 557aa long hypothetical CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.955 |
| PH0698 | PH1997 | gene:9377645 | gene:9379011 | 160aa long hypothetical nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 156aa long hypothetical protein; Catalyzes the deamination of dCTP to dUTP. | 0.934 |
| PH0698 | PH1999 | gene:9377645 | gene:9379013 | 160aa long hypothetical nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 342aa long hypothetical acidic ribosomal protein P0 (L10E); Forms the large subunit's ribosomal stalk, playing a central role in the interaction of the ribosome with elongation factors; the stalk complex of P.horikoshii binds to E.coli large subunits and confers on them the ability to interact with eukaryotic elongation factors. Each succesive L12 dimer bound along the P0 spine increases the GTPase activity of elongation factors and increases translation by reconsituted ribosomes, although the first site is the most stimulatory; Belongs to the universal ribosomal protein uL10 family. | 0.610 |
| PH1347 | PH0698 | gene:9378323 | gene:9377645 | 308aa long hypothetical GMP synthase; Catalyzes the synthesis of GMP from XMP. | 160aa long hypothetical nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 0.820 |
| PH1347 | PH1408 | gene:9378323 | gene:9378384 | 308aa long hypothetical GMP synthase; Catalyzes the synthesis of GMP from XMP. | 226aa long hypothetical protein; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.558 |
| PH1347 | PH1478 | gene:9378323 | gene:9378456 | 308aa long hypothetical GMP synthase; Catalyzes the synthesis of GMP from XMP. | 629aa long hypothetical arginyl-tRNA synthetase; Similar to PIR:F64329 percent identity: 40.975 in 639aa; Swiss_Prot:P43832 percent identity: 40.000 in 192aa. motif=aminoacyl-transfer RNA synthetases class-I signature. | 0.888 |
| PH1347 | PH1629 | gene:9378323 | gene:9378619 | 308aa long hypothetical GMP synthase; Catalyzes the synthesis of GMP from XMP. | 205aa long hypothetical 30S ribosomal protein S2; Similar to Swiss_Prot:P54109 percent identity: 66.667 in 192aa; owl:SS56KBFR54 percent identity: 57.071 in 198aa; Swiss_Prot:P29202 percent identity: 57.627 in 177aa. motif=ribosomal protein S2 signatures; Belongs to the universal ribosomal protein uS2 family. | 0.505 |
| PH1347 | PH1634 | gene:9378323 | gene:9378625 | 308aa long hypothetical GMP synthase; Catalyzes the synthesis of GMP from XMP. | 142aa long hypothetical 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.565 |
| PH1347 | PH1792 | gene:9378323 | gene:9378794 | 308aa long hypothetical GMP synthase; Catalyzes the synthesis of GMP from XMP. | 557aa long hypothetical CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates. | 0.959 |
| PH1347 | PH1999 | gene:9378323 | gene:9379013 | 308aa long hypothetical GMP synthase; Catalyzes the synthesis of GMP from XMP. | 342aa long hypothetical acidic ribosomal protein P0 (L10E); Forms the large subunit's ribosomal stalk, playing a central role in the interaction of the ribosome with elongation factors; the stalk complex of P.horikoshii binds to E.coli large subunits and confers on them the ability to interact with eukaryotic elongation factors. Each succesive L12 dimer bound along the P0 spine increases the GTPase activity of elongation factors and increases translation by reconsituted ribosomes, although the first site is the most stimulatory; Belongs to the universal ribosomal protein uL10 family. | 0.728 |
| PH1408 | PH0698 | gene:9378384 | gene:9377645 | 226aa long hypothetical protein; Catalyzes the reversible phosphorylation of UMP to UDP. | 160aa long hypothetical nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. | 0.954 |
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