STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crcACrcA; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors. (165 aa)    
Predicted Functional Partners:
arnT-2
ArnT; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family.
  
  
 0.938
yhjW
YhjW; Inner membrane protein YhjW; Similar to Pantoea sp. At-9b, sulfatase (NCBI: ZP_05732361.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
  
 0.933
yeiU
YeiU; Involved in the modification of the lipid A domain of lipopolysaccharides (LPS). Transfers a phosphate group from undecaprenyl pyrophosphate (C55-PP) to lipid A to form lipid A 1- diphosphate. Contributes to the recycling of undecaprenyl phosphate (C55-P); Belongs to the LpxT phosphotransferase family.
  
  
 0.923
aspH
AspH; Aspartyl/asparaginyl beta- hydroxylase; Similar to Erwinia pyrifoliae Ep1/96, hypothetical protein EpC_26840 (NCBI: YP_002649673.1); COG: Posttranslational modification, protein turnover, chaperones; Subcellular localization as predicted by Psort 2.0: Unknown.
     
 0.918
msbB
MsbB; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A.
     
 0.917
lpxK
LpxK; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).
     
 0.911
kdtA
KdtA; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
     
  0.900
yrfF
YrfF; Putative membrane protein IgaA homolog; Similar to Pantoea sp. At-9b, Intracellular growth attenuator IgaA (NCBI: ZP_05731101.1); COG: Cell division and chromosome partitioning; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
     0.751
yhdP
YhdP; Exported Protein; Similar to Pantoea sp. At-9b, conserved hypothetical protein (NCBI: ZP_05732142.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
     0.634
yqeI-2
YqeI; Transcriptional Regulatory Protein; Similar to Erwinia tasmaniensis Et1/99, Putative transcriptional regulator (NCBI: YP_001906342.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Unknown.
  
     0.560
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.