STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tatETatE; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatE shares overlapping functions with TatA; Belongs to the TatA/E family. TatE subfamily. (67 aa)    
Predicted Functional Partners:
tatB
TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
 
 0.949
tatC
TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
 
 0.933
guaA-2
GuaA; Catalyzes the synthesis of GMP from XMP.
  
  
 0.848
ybeM
YbeM; Hydrolase Carbon-Nitrogen Family; Similar to Pantoea sp. At-9b, Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase (NCBI: ZP_05727596.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
      0.704
ipdC
IpdC; Indole-3-pyruvate decarboxylase; Similar to Pantoea agglomerans, indolepyruvate decarboxylase (NCBI: AAB06571.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
      
 0.693
yfgM
YfgM; Transmembrane Protein; Similar to Pantoea sp. At-9b, conserved hypothetical protein (NCBI: ZP_05727755.1); COG: Unknown Function; Subcellular localization as predicted by Psort 2.0: Unknown.
 
     0.655
glpG
GlpG; Rhomboid-type serine protease that catalyzes intramembrane proteolysis.
   
 
 0.628
dsbA
DsbA; Thiol:disulfide interchange protein DsbA precursor; Similar to Pantoea sp. At-9b, DSBA oxidoreductase (NCBI: ZP_05730425.1); COG: Posttranslational modification, protein turnover, chaperones; Subcellular localization as predicted by Psort 2.0: Periplasmic.
  
   
 0.604
dsbC
DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.
  
    0.577
sspB
SspB; Stringent starvation protein B; Similar to Pantoea sp. At-9b, Stringent starvation protein B (NCBI: ZP_05730855.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
  
    0.557
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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