STRINGSTRING
PANA_1407 protein (Pantoea ananatis LMG20103) - STRING interaction network
"PANA_1407" - Agp in Pantoea ananatis LMG20103
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PANA_1407Agp; Glucose-1-phosphatase precursor; Similar to Pantoea sp. At-9b, Glucose-1-phosphatase (NCBI- ZP_05728941.1); COG- Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0- Periplasmic (551 aa)    
Predicted Functional Partners:
pgm
Pgm; Phosphoglucomutase; Similar to Pantoea sp. At-9b, phosphoglucomutase, alpha-D-glucose phosphate-specific (NCBI- ZP_05732387.1); COG- Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0- Unknown (546 aa)
         
  0.900
PANA_4017
Uncharacterized protein; Polyphosphate Glucokinase; Similar to Agrobacterium tumefaciens str. C58, hypothetical protein Atu4836 (NCBI- NP_355828.1); COG- Transcription; Subcellular localization as predicted by Psort 2.0- Unknown (231 aa)
         
    0.900
yihR
YihR; Aldose-1-Epimerase; Similar to Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, hypothetical protein SPA3861 (NCBI- YP_152941.1); COG- Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0- Unknown (282 aa)
         
    0.900
glk
Glucokinase; Similar to Pantoea sp. At-9b, glucokinase (NCBI- ZP_05727641.1); COG- Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0- Cytoplasmic; Belongs to the bacterial glucokinase family (359 aa)
         
    0.900
galM
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer (353 aa)
         
    0.900
yihX
YihX; Phosphatase YihX; Similar to Pantoea sp. At-9b, HAD-superfamily hydrolase, subfamily IA, variant 3 (NCBI- ZP_05730415.1); COG- General function prediction only; Subcellular localization as predicted by Psort 2.0- Unknown (207 aa)
         
    0.800
PANA_3700
Glycogen debranching enzyme; Removes maltotriose and maltotetraose chains that are attached by 1,6-alpha-linkage to the limit dextrin main chain, generating a debranched limit dextrin (666 aa)
         
    0.800
glgC
Glucose-1-phosphate adenylyltransferase; Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans (448 aa)
         
    0.800
glgP
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (815 aa)
         
    0.800
PANA_3692
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (826 aa)
         
    0.800
Your Current Organism:
Pantoea ananatis LMG20103
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis LMG20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
Server load: low (6%) [HD]