STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agp-2Agp; Glucose-1-phosphatase precursor; Similar to Pantoea sp. At-9b, Glucose-1-phosphatase (NCBI: ZP_05728941.1); COG: Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0: Periplasmic. (551 aa)    
Predicted Functional Partners:
pgm
Pgm; Phosphoglucomutase; Similar to Pantoea sp. At-9b, phosphoglucomutase, alpha-D-glucose phosphate-specific (NCBI: ZP_05732387.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
     
 0.906
galM
GalM; Converts alpha-aldose to the beta-anomer.
     
 0.902
yihR
YihR; Aldose-1-Epimerase; Similar to Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150, hypothetical protein SPA3861 (NCBI: YP_152941.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown.
     
 0.902
glk
Glk; Glucokinase; Similar to Pantoea sp. At-9b, glucokinase (NCBI: ZP_05727641.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the bacterial glucokinase family.
     
  0.900
yihX
YihX; Phosphatase YihX; Similar to Pantoea sp. At-9b, HAD-superfamily hydrolase, subfamily IA, variant 3 (NCBI: ZP_05730415.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown.
     
  0.900
PANA_4017
Hypothetical Protein; Polyphosphate Glucokinase; Similar to Agrobacterium tumefaciens str. C58, hypothetical protein Atu4836 (NCBI: NP_355828.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Unknown.
     
  0.900
malQ
MalQ; 4-alpha-glucanotransferase; Similar to Pantoea sp. At-9b, 4-alpha-glucanotransferase (NCBI: ZP_05729909.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
     
  0.800
malP
MalP; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
     
  0.800
galU
GalU; UTP--glucose-1-phosphate uridylyltransferase; Similar to Erwinia tasmaniensis Et1/99, UTP--glucose-1-phosphate uridylyltransferase subunit GalU (NCBI: YP_001907515.1); COG: Cell wall/membrane/envelope biogenesis; Subcellular localization as predicted by Psort 2.0: Unknown.
     
  0.800
galF
GalF; UTP--glucose-1-phosphate uridylyltransferase; Similar to Pantoea stewartii subsp. stewartii, GalF (NCBI: ACO05922.1); COG: Cell wall/envelope/membrane biogenesis; Subcellular localization as predicted by Psort 2.0: Unknown.
     
  0.800
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.