STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bglHBglH; Beta-glucosidase; Similar to Dickeya zeae Ech1591, glycoside hydrolase family 1 (NCBI: YP_003003107.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown; Belongs to the glycosyl hydrolase 1 family. (490 aa)    
Predicted Functional Partners:
ascF
AscF; PTS system arbutin-, cellobiose-, and salicin-specific EIIBC component; Similar to Serratia proteamaculans 568, cellobiose/arbutin/salicin-specific PTS system components IIBC (NCBI: YP_001476810.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 
 0.961
arbF
ArbF; PTS system beta-glucoside-specific EIIBCA component; Similar to Enterobacter sakazakii ATCC BAA-894, hypothetical protein ESA_02545 (NCBI: YP_001438626.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
  
 0.942
scrB
ScrB; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
  
 
 0.925
yicI
YicI; Alpha-glucosidase 2; Similar to Enterobacter sakazakii ATCC BAA-894, hypothetical protein ESA_02513 (NCBI: YP_001438594.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown; Belongs to the glycosyl hydrolase 31 family.
  
 0.912
pgi
Pgi; Glucose-6-phosphate isomerase; Similar to Pantoea sp. At-9b, Glucose-6-phosphate isomerase (NCBI: ZP_05731768.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the GPI family.
     
 0.906
crr
Crr; Glucose-specific phosphotransferase enzyme IIA component; Similar to Erwinia tasmaniensis Et1/99, glucose-specific PTS system component (NCBI: YP_001907040.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic.
  
 
 0.906
bglX
BglX; Periplasmic beta-glucosidase precursor; Similar to Pantoea sp. At-9b, glycoside hydrolase family 3 domain protein (NCBI: ZP_05731643.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Periplasmic; Belongs to the glycosyl hydrolase 3 family.
    
 0.904
glk
Glk; Glucokinase; Similar to Pantoea sp. At-9b, glucokinase (NCBI: ZP_05727641.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic; Belongs to the bacterial glucokinase family.
    
  0.904
PANA_4017
Hypothetical Protein; Polyphosphate Glucokinase; Similar to Agrobacterium tumefaciens str. C58, hypothetical protein Atu4836 (NCBI: NP_355828.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Unknown.
  
 
 0.904
yeaD
YeaD; UPF0010 protein YeaD; Similar to Pantoea sp. At-9b, Aldose 1-epimerase (NCBI: ZP_05729430.1); COG: General function prediction only; Subcellular localization as predicted by Psort 2.0: Unknown; Belongs to the glucose-6-phosphate 1-epimerase family.
     
 0.902
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.