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gyaR protein (Pantoea ananatis LMG20103) - STRING interaction network
"gyaR" - GyaR in Pantoea ananatis LMG20103
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
gyaRGyaR; Glyoxylate reductase; Similar to Pseudomonas putida KT2440, D-isomer specific 2-hydroxyacid dehydrogenase family protein (NCBI- NP_744678.1); COG- Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0- Cytoplasmic (326 aa)    
Predicted Functional Partners:
serC
Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine (367 aa)
   
  0.962
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily (250 aa)
 
   
  0.907
PANA_0650
Probable phosphoglycerate mutase GpmB; Similar to Pantoea sp. At-9b, Phosphoglycerate mutase (NCBI- ZP_05732509.1); COG- Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0- Unknown (215 aa)
       
    0.901
PANA_1608
Uncharacterized protein; Similar to Pantoea sp. At-9b, conserved hypothetical protein (NCBI- ZP_05729489.1); COG- Unknown Function; Subcellular localization as predicted by Psort 2.0- Unknown (109 aa)
              0.845
PANA_2952
SerA; D-3-phosphoglycerate dehydrogenase; Similar to Klebsiella pneumoniae 342, D-isomer specific 2-hydroxyacid dehydrogenase family protein (NCBI- YP_002236948.1); COG- Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0- Cytoplasmic (313 aa)
   
   
 
0.844
PANA_3196
SerA; D-3-phosphoglycerate dehydrogenase; Similar to Pantoea sp. At-9b, D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (NCBI- ZP_05731464.1); COG- Coenzyme transport and metabolism; Subcellular localization as predicted by Psort 2.0- Cytoplasmic (412 aa)
         
 
0.800
PANA_1605
Uncharacterized protein; Similar to Enterobacter sp. 638, TPR repeat-containing protein (NCBI- YP_001177833.1); COG- Unknown Function; Subcellular localization as predicted by Psort 2.0- Unknown (183 aa)
   
      0.431
Your Current Organism:
Pantoea ananatis LMG20103
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis LMG20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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