STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mocBMocB; Putative rhizopine-binding protein precursor; Similar to Klebsiella pneumoniae subsp. pneumoniae MGH 78578, putative periplasmic binding protein (NCBI: YP_001334189.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Periplasmic. (307 aa)    
Predicted Functional Partners:
rbsC-9
RbsC; Ribose transport system permease protein RbsC; Similar to Pantoea sp. At-9b, Monosaccharide-transporting ATPase (NCBI: ZP_05728949.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 0.989
mglA
MglA; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
  0.978
rbsC-7
RbsC; Ribose transport system permease protein RbsC; Similar to Tolumonas auensis DSM 9187, inner-membrane translocator (NCBI: YP_002893126.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 0.851
rbsC
RbsC; Ribose transport system permease protein RbsC; Similar to Pantoea sp. At-9b, Monosaccharide-transporting ATPase (NCBI: ZP_05729593.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 0.849
rbsC-4
RbsC; Ribose transport system permease protein RbsC; Similar to Pantoea sp. At-9b, Monosaccharide-transporting ATPase (NCBI: ZP_05729856.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 0.848
rbsC-2
RbsC; Ribose transport system permease protein RbsC; Similar to Rhizobium leguminosarum bv. viciae 3841, putative permease component of ABC transporter (NCBI: YP_770982.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 
 0.847
rbsC-6
RbsC; Ribose transport system permease protein RbsC; Similar to Pantoea ananatis, putative sugar ABC transporter, permease protein (NCBI: BAG32264.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 0.847
rbsC-10
RbsC; Ribose transport system permease protein RbsC; Similar to Pectobacterium wasabiae WPP163, inner-membrane translocator (NCBI: YP_003261064.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 
 0.847
araH
AraH; L-arabinose transport system permease protein AraH; Similar to Pantoea sp. At-9b, Monosaccharide-transporting ATPase (NCBI: ZP_05727950.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 0.836
rbsC-5
RbsC; Ribose transport system permease protein RbsC; Similar to Pantoea sp. At-9b, Monosaccharide-transporting ATPase (NCBI: ZP_05727361.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Inner Membrane.
 
 0.818
Your Current Organism:
Pantoea ananatis
NCBI taxonomy Id: 706191
Other names: P. ananatis LMG 20103, Pantoea ananatis LMG 20103, Pantoea ananatis str. LMG 20103, Pantoea ananatis strain LMG 20103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.