Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
gnl | gnl-2 | PANA_0366 | PANA_2953 | Gnl; Gluconolactonase precursor; Similar to Pantoea sp. At-9b, Gluconolactonase (NCBI: ZP_05728077.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. | Gnl; Gluconolactonase precursor; Similar to Burkholderia phymatum STM815, SMP-30/gluconolaconase/LRE domain-containing protein (NCBI: YP_001862137.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic. | 0.925 |
gnl | yvrE | PANA_0366 | PANA_2732 | Gnl; Gluconolactonase precursor; Similar to Pantoea sp. At-9b, Gluconolactonase (NCBI: ZP_05728077.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. | YvrE; Senescence Marker Protein-; Similar to Pantoea sp. At-9b, SMP-30/Gluconolaconase/LRE domain protein (NCBI: ZP_05727628.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. | 0.623 |
gnl-2 | gnl | PANA_2953 | PANA_0366 | Gnl; Gluconolactonase precursor; Similar to Burkholderia phymatum STM815, SMP-30/gluconolaconase/LRE domain-containing protein (NCBI: YP_001862137.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic. | Gnl; Gluconolactonase precursor; Similar to Pantoea sp. At-9b, Gluconolactonase (NCBI: ZP_05728077.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. | 0.925 |
gnl-2 | yvrE | PANA_2953 | PANA_2732 | Gnl; Gluconolactonase precursor; Similar to Burkholderia phymatum STM815, SMP-30/gluconolaconase/LRE domain-containing protein (NCBI: YP_001862137.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic. | YvrE; Senescence Marker Protein-; Similar to Pantoea sp. At-9b, SMP-30/Gluconolaconase/LRE domain protein (NCBI: ZP_05727628.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. | 0.591 |
iclR | yvrE | PANA_0240 | PANA_2732 | IclR; Acetate operon repressor; Similar to Pantoea sp. At-9b, transcriptional regulator, IclR family (NCBI: ZP_05731762.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Unknown. | YvrE; Senescence Marker Protein-; Similar to Pantoea sp. At-9b, SMP-30/Gluconolaconase/LRE domain protein (NCBI: ZP_05727628.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. | 0.423 |
rspA | yvrE | PANA_0592 | PANA_2732 | RspA; Has low D-gluconate dehydratase activity (in vitro), suggesting that it has no significant role in D-gluconate degradation in vivo. Has no detectable activity with a panel of 70 other acid sugars (in vitro); Belongs to the mandelate racemase/muconate lactonizing enzyme family. GalD subfamily. | YvrE; Senescence Marker Protein-; Similar to Pantoea sp. At-9b, SMP-30/Gluconolaconase/LRE domain protein (NCBI: ZP_05727628.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. | 0.529 |
yvrE | gnl | PANA_2732 | PANA_0366 | YvrE; Senescence Marker Protein-; Similar to Pantoea sp. At-9b, SMP-30/Gluconolaconase/LRE domain protein (NCBI: ZP_05727628.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. | Gnl; Gluconolactonase precursor; Similar to Pantoea sp. At-9b, Gluconolactonase (NCBI: ZP_05728077.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. | 0.623 |
yvrE | gnl-2 | PANA_2732 | PANA_2953 | YvrE; Senescence Marker Protein-; Similar to Pantoea sp. At-9b, SMP-30/Gluconolaconase/LRE domain protein (NCBI: ZP_05727628.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. | Gnl; Gluconolactonase precursor; Similar to Burkholderia phymatum STM815, SMP-30/gluconolaconase/LRE domain-containing protein (NCBI: YP_001862137.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Cytoplasmic. | 0.591 |
yvrE | iclR | PANA_2732 | PANA_0240 | YvrE; Senescence Marker Protein-; Similar to Pantoea sp. At-9b, SMP-30/Gluconolaconase/LRE domain protein (NCBI: ZP_05727628.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. | IclR; Acetate operon repressor; Similar to Pantoea sp. At-9b, transcriptional regulator, IclR family (NCBI: ZP_05731762.1); COG: Transcription; Subcellular localization as predicted by Psort 2.0: Unknown. | 0.423 |
yvrE | rspA | PANA_2732 | PANA_0592 | YvrE; Senescence Marker Protein-; Similar to Pantoea sp. At-9b, SMP-30/Gluconolaconase/LRE domain protein (NCBI: ZP_05727628.1); COG: Carbohydrate transport and metabolism; Subcellular localization as predicted by Psort 2.0: Unknown. | RspA; Has low D-gluconate dehydratase activity (in vitro), suggesting that it has no significant role in D-gluconate degradation in vivo. Has no detectable activity with a panel of 70 other acid sugars (in vitro); Belongs to the mandelate racemase/muconate lactonizing enzyme family. GalD subfamily. | 0.529 |