STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHO66604.1Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology. (556 aa)    
Predicted Functional Partners:
KHO64504.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.994
KHO66521.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.975
KHO64564.1
Ferrous iron transporter C; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.975
KHO65599.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.971
KHO66010.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.966
KHO65536.1
Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.937
KHO64074.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.936
KHO64990.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.907
KHO64763.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.860
KHO64766.1
Pilus assembly protein PilG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.857
Your Current Organism:
Pseudomonas flexibilis
NCBI taxonomy Id: 706570
Other names: ATCC 29606, JCM 14085 [[Pseudomonas tuomuerensis]], LMG 29034, LMG:29034, P. flexibilis, Pseudomonas tuomuerensis, Pseudomonas tuomuerensis Xin et al. 2009, Serpens flexibilis, strain 78-123 [[Pseudomonas tuomuerensis]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.