STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tolBTol-pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. (427 aa)    
Predicted Functional Partners:
pal
Outer membrane protein/peptidoglycan-associated (lipo)protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.994
cpoB
Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.
 
  
 0.970
AFM22836.1
Cell division and transport-associated protein TolQ; PFAM: MotA/TolQ/ExbB proton channel family; TIGRFAM: TolQ protein; TC 2.C.1.2.1.
 
  
 0.967
AFM22835.1
PFAM: Biopolymer transport protein ExbD/TolR; TIGRFAM: TolR protein.
 
  
 0.962
AFM24200.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: OmpA family.
  
 
 0.921
AFM26163.1
Flagellar motor protein; PFAM: OmpA family.
  
 
 0.921
AFM22834.1
TolA protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TolA protein; TonB family C-terminal domain.
  
 
 0.903
AFM28063.1
Hypothetical protein.
  
 
 0.873
AFM23891.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
 
 
 0.867
AFM26019.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
 
 
 0.837
Your Current Organism:
Desulfomonile tiedjei
NCBI taxonomy Id: 706587
Other names: D. tiedjei DSM 6799, Desulfomonile tiedjei DCB-1, Desulfomonile tiedjei DSM 6799, Desulfomonile tiedjei str. DSM 6799, Desulfomonile tiedjei strain DSM 6799
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