STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A183THV8Uncharacterized protein. (270 aa)    
Predicted Functional Partners:
A0A183TF29
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.989
A0A183T7Z5
Uncharacterized protein.
   
 0.986
A0A183TI13
MAT1 domain-containing protein.
    
 0.985
A0A183T3P4
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
   
 0.978
A0A183TK48
Transcription initiation factor IIB.
    
 0.978
SSLN_LOCUS4752
Uncharacterized protein.
    
 0.977
SSLN_LOCUS8084
Uncharacterized protein.
    
 0.973
A0A3P7CY23
TFIIE beta domain-containing protein.
    
 0.973
A0A183T236
General transcription factor IIF subunit 2.
   
  0.972
A0A183THP4
RPOL4c domain-containing protein.
    
 0.972
Your Current Organism:
Schistocephalus solidus
NCBI taxonomy Id: 70667
Other names: S. solidus
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