STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D2A2U5_TRICAATP-dependent RNA helicase vasa, isoform A-like Protein. (476 aa)    
Predicted Functional Partners:
D6X2Y6_TRICA
RNA methyltransferase-like protein 1 homolog.
  
 
 0.905
D6WAZ0_TRICA
WD repeat-containing protein 46-like Protein.
   
 0.896
D1ZZY9_TRICA
ESF1 homolog-like Protein.
   
 
 0.889
D2A5R4_TRICA
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.857
D2A199_TRICA
Something about silencing protein 10-like Protein.
   
 0.850
D6WLZ7_TRICA
Neuroguidin-A-like Protein.
   
 0.850
A0A139WJU0
KRR1 small subunit processome component homolog-like protein; Belongs to the tetraspanin (TM4SF) family.
   
 0.843
D6WHF8_TRICA
ATP-dependent RNA helicase bel-like Protein; Belongs to the DEAD box helicase family.
  
0.841
D6X2B8_TRICA
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 0.841
D6WKF7_TRICA
Uncharacterized protein.
   
 0.822
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.