STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SdcSyndecan; Cell surface proteoglycan; Belongs to the syndecan proteoglycan family. (197 aa)    
Predicted Functional Partners:
D6WEC4_TRICA
Peripheral plasma membrane protein CASK-like Protein; Belongs to the MAGUK family.
    
 0.958
D6WM21_TRICA
Division abnormally delayed protein-like Protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.830
D6WK54_TRICA
Heparan-sulfate 6-O-sulfotransferase; 6-O-sulfation enzyme which catalyzes the transfer of sulfate from 3'-phosphoadenosine 5'-phosphosulfate (PAPS) to position 6 of the N-sulfoglucosamine residue (GlcNS) of heparan sulfate.
     
 0.776
D7EJH3_TRICA
WSC domain-containing protein.
    
 0.774
A0A139WHC0
Division abnormally delayed protein-like Protein; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
    
 0.770
D6WJ22_TRICA
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase-like Protein.
     
 0.697
Hs2st
Heparan-sulfate-2-sulfotransferase.
     
 0.697
D6WZI2_TRICA
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase-like Protein.
     
 0.690
D6WWF7_TRICA
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase-like Protein.
     
 0.673
FGF-1
Fibroblast growth factor 3-like Protein; Belongs to the heparin-binding growth factors family.
    
 0.656
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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