STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nkx2.1Scarecrow. (356 aa)    
Predicted Functional Partners:
Fkh
Fork head.
    
 
 0.608
Optix
Sine oculis-related homeobox 3.
      
 0.602
Fez
Fez family zinc finger protein 2-like Protein.
    
 
 0.570
byn
Transcription factor.
   
 
 0.560
D6W7M3_TRICA
Myocyte-specific enhancer factor 2-like Protein.
    
 
 0.507
Six4
Sine oculis-related homeobox 4.
      
 0.505
Dad
Mothers against decapentaplegic homolog.
    
 
 0.478
Ase
BHLH domain-containing protein.
    
 
 0.469
Mirr
Homeobox protein araucan-like Protein.
      
 0.451
LMX-HD-2
LIM homeobox transcription factor 1, beta.
      
 0.451
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.