STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D6WST5_TRICAHigh mobility group protein 20A-like Protein. (303 aa)    
Predicted Functional Partners:
D7EII7_TRICA
Actin-related protein 8; Plays an important role in the functional organization of mitotic chromosomes. Exhibits low basal ATPase activity, and unable to polymerize; Belongs to the actin family. ARP8 subfamily.
    
 0.630
A0A139WJB2
REST corepressor-like Protein.
   
 0.611
D6W951_TRICA
Histone H2A; Belongs to the histone H2A family.
   
 0.605
A0A139WNH8
Putative lysine-specific histone demethylase 1-like Protein.
   
 0.599
A0A139WNM3
Putative lysine-specific histone demethylase 1-like Protein.
   
 0.599
D6WV41_TRICA
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
    
 0.573
D2A3F8_TRICA
General transcription factor IIH subunit 1-like Protein.
    
 0.566
A0A139WFP8
Actin-related protein 5-like protein; Belongs to the actin family.
    
 0.551
A0A139WBN9
General transcription factor IIH subunit 3-like protein.
    
 0.545
D6WEU3_TRICA
DNA excision repair protein haywire-like Protein.
   
 0.540
Your Current Organism:
Tribolium castaneum
NCBI taxonomy Id: 7070
Other names: T. castaneum, red flour beetle, rust-red flour beetle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.